Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBP50607 AC002056.1-201ENST00000395613 760 ntBASIC17.65■□□□□ 0.42
TUBP50607 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBP50607 CEND1P1-201ENST00000451006 455 ntBASIC17.65■□□□□ 0.42
TUBP50607 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBP50607 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TUBP50607 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 AL021920.2-201ENST00000624828 1351 ntBASIC17.65■□□□□ 0.42
TUBP50607 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TUBP50607 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TUBP50607 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
TUBP50607 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TUBP50607 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 AC008741.2-201ENST00000612792 3115 ntBASIC17.64■□□□□ 0.41
TUBP50607 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 AC068418.2-201ENST00000577309 3703 ntBASIC17.64■□□□□ 0.41
TUBP50607 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.64■□□□□ 0.41
TUBP50607 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBP50607 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBP50607 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBP50607 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
TUBP50607 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 AC092919.2-201ENST00000623631 1645 ntBASIC17.64■□□□□ 0.41
TUBP50607 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TUBP50607 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBP50607 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBP50607 AC092850.2-201ENST00000623821 2697 ntBASIC17.64■□□□□ 0.41
TUBP50607 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TUBP50607 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 AC012569.1-201ENST00000591191 1524 ntBASIC17.63■□□□□ 0.41
TUBP50607 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBP50607 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.63■□□□□ 0.41
TUBP50607 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.63■□□□□ 0.41
TUBP50607 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TUBP50607 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TUBP50607 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TUBP50607 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBP50607 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBP50607 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms