Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BCRP2-202ENST00000447763 634 ntBASIC18.49■□□□□ 0.55
HTTP42858 BCRP6-201ENST00000510112 632 ntBASIC18.49■□□□□ 0.55
HTTP42858 BCRP7-201ENST00000511549 544 ntBASIC18.49■□□□□ 0.55
HTTP42858 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.49■□□□□ 0.55
HTTP42858 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HTTP42858 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.49■□□□□ 0.55
HTTP42858 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.49■□□□□ 0.55
HTTP42858 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.49■□□□□ 0.55
HTTP42858 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.49■□□□□ 0.55
HTTP42858 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.49■□□□□ 0.55
HTTP42858 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.49■□□□□ 0.55
HTTP42858 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HTTP42858 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HTTP42858 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HTTP42858 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HTTP42858 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.48■□□□□ 0.55
HTTP42858 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
HTTP42858 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.48■□□□□ 0.55
HTTP42858 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.48■□□□□ 0.55
HTTP42858 AP001350.2-201ENST00000625104 1094 ntBASIC18.48■□□□□ 0.55
HTTP42858 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HTTP42858 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.48■□□□□ 0.55
HTTP42858 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
HTTP42858 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTTP42858 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HTTP42858 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.47■□□□□ 0.55
HTTP42858 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 BTBD6P1-201ENST00000412176 1267 ntBASIC18.47■□□□□ 0.55
HTTP42858 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.47■□□□□ 0.55
HTTP42858 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.47■□□□□ 0.55
HTTP42858 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.47■□□□□ 0.55
HTTP42858 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.47■□□□□ 0.55
HTTP42858 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.47■□□□□ 0.55
HTTP42858 AC015967.2-201ENST00000624092 234 ntBASIC18.47■□□□□ 0.55
HTTP42858 AC006435.4-201ENST00000625037 234 ntBASIC18.47■□□□□ 0.55
HTTP42858 AL356737.1-201ENST00000634391 234 ntBASIC18.47■□□□□ 0.55
HTTP42858 AC093525.9-201ENST00000624961 1746 ntBASIC18.47■□□□□ 0.55
HTTP42858 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HTTP42858 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.47■□□□□ 0.55
HTTP42858 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.47■□□□□ 0.55
HTTP42858 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.47■□□□□ 0.55
HTTP42858 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.47■□□□□ 0.55
HTTP42858 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 DUX4L45-201ENST00000566406 1057 ntBASIC18.47■□□□□ 0.55
HTTP42858 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.47■□□□□ 0.55
HTTP42858 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HTTP42858 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.47■□□□□ 0.55
HTTP42858 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.47■□□□□ 0.55
HTTP42858 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.47■□□□□ 0.55
HTTP42858 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTTP42858 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.46■□□□□ 0.55
HTTP42858 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.46■□□□□ 0.55
HTTP42858 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HTTP42858 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HTTP42858 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.46■□□□□ 0.55
HTTP42858 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HTTP42858 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.46■□□□□ 0.55
HTTP42858 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.46■□□□□ 0.55
HTTP42858 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTTP42858 AL162726.2-201ENST00000438986 1017 ntBASIC18.46■□□□□ 0.55
HTTP42858 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.46■□□□□ 0.55
HTTP42858 AC020765.3-201ENST00000613051 740 ntBASIC18.46■□□□□ 0.55
HTTP42858 AC092068.3-201ENST00000587894 2016 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms