Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TUBB8P7-204ENST00000567960 1332 ntBASIC20.81■□□□□ 0.92
RFC4P35249 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFC4P35249 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.81■□□□□ 0.92
RFC4P35249 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.81■□□□□ 0.92
RFC4P35249 AC092658.1-201ENST00000505836 891 ntBASIC20.81■□□□□ 0.92
RFC4P35249 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RFC4P35249 SDHAP3-202ENST00000515467 728 ntBASIC20.81■□□□□ 0.92
RFC4P35249 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.81■□□□□ 0.92
RFC4P35249 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.81■□□□□ 0.92
RFC4P35249 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RFC4P35249 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.81■□□□□ 0.92
RFC4P35249 CTBP2P3-201ENST00000585629 1255 ntBASIC20.81■□□□□ 0.92
RFC4P35249 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.81■□□□□ 0.92
RFC4P35249 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 KRT8P12-202ENST00000472924 1397 ntBASIC20.81■□□□□ 0.92
RFC4P35249 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.81■□□□□ 0.92
RFC4P35249 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFC4P35249 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.81■□□□□ 0.92
RFC4P35249 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.8■□□□□ 0.92
RFC4P35249 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.8■□□□□ 0.92
RFC4P35249 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
RFC4P35249 AC023310.3-201ENST00000557027 670 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AC100756.1-201ENST00000562736 682 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AC138749.3-201ENST00000567691 622 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AC024267.1-201ENST00000582320 895 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 AC013467.2-201ENST00000605472 835 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AC116165.1-201ENST00000611806 668 ntBASIC20.8■□□□□ 0.92
RFC4P35249 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.8■□□□□ 0.92
RFC4P35249 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.8■□□□□ 0.92
RFC4P35249 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RFC4P35249 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.8■□□□□ 0.92
RFC4P35249 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC4P35249 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC4P35249 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC4P35249 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC4P35249 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
RFC4P35249 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC4P35249 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RFC4P35249 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC4P35249 ELK1P1-201ENST00000485699 580 ntBASIC20.79■□□□□ 0.92
RFC4P35249 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC4P35249 AC123567.1-201ENST00000548294 1261 ntBASIC20.79■□□□□ 0.92
RFC4P35249 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
RFC4P35249 MIR4259-201ENST00000584466 101 ntBASIC20.79■□□□□ 0.92
RFC4P35249 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC4P35249 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC4P35249 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC4P35249 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC4P35249 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC4P35249 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RFC4P35249 KRT8P39-201ENST00000396270 1433 ntBASIC20.78■□□□□ 0.92
RFC4P35249 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.78■□□□□ 0.92
RFC4P35249 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC4P35249 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFC4P35249 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC4P35249 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms