Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHRNA3P32297 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 LAGE3P1-201ENST00000425356 484 ntBASIC17.69■□□□□ 0.42
CHRNA3P32297 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHRNA3P32297 SIGLEC30P-201ENST00000455569 941 ntBASIC17.69■□□□□ 0.42
CHRNA3P32297 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNA3P32297 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.69■□□□□ 0.42
CHRNA3P32297 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 AC008735.5-201ENST00000623544 497 ntBASIC17.69■□□□□ 0.42
CHRNA3P32297 AF228730.7-201ENST00000641842 219 ntBASIC17.69■□□□□ 0.42
CHRNA3P32297 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA3P32297 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 AC148477.5-201ENST00000625164 1645 ntBASIC17.69■□□□□ 0.42
CHRNA3P32297 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 ALOX12P2-203ENST00000570921 1945 ntBASIC17.68■□□□□ 0.42
CHRNA3P32297 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA3P32297 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 HLA-J-202ENST00000469281 1241 ntBASIC17.68■□□□□ 0.42
CHRNA3P32297 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNA3P32297 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 SLC25A1P1-201ENST00000528351 927 ntBASIC17.68■□□□□ 0.42
CHRNA3P32297 AC105339.3-201ENST00000560043 636 ntBASIC17.68■□□□□ 0.42
CHRNA3P32297 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA3P32297 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA3P32297 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA3P32297 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 AC008894.3-201ENST00000624324 3103 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 AC007950.2-201ENST00000615045 2347 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.67■□□□□ 0.42
CHRNA3P32297 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHRNA3P32297 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRNA3P32297 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 AC092910.1-201ENST00000482027 1129 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 DUX4L17-201ENST00000557360 1267 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 LINC00895-201ENST00000629028 1637 ntBASIC17.67■□□□□ 0.42
CHRNA3P32297 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms