Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 SIGLEC16-201ENST00000599858 1437 ntBASIC14.34□□□□□ -0.11
CHATP28329 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.34□□□□□ -0.11
CHATP28329 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.34□□□□□ -0.11
CHATP28329 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.34□□□□□ -0.11
CHATP28329 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 HLA-J-202ENST00000469281 1241 ntBASIC14.34□□□□□ -0.11
CHATP28329 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHATP28329 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.34□□□□□ -0.11
CHATP28329 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.34□□□□□ -0.11
CHATP28329 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.34□□□□□ -0.11
CHATP28329 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHATP28329 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CHATP28329 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.34□□□□□ -0.11
CHATP28329 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.34□□□□□ -0.11
CHATP28329 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CHATP28329 AC092364.2-201ENST00000596710 2692 ntBASIC14.34□□□□□ -0.11
CHATP28329 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.34□□□□□ -0.11
CHATP28329 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHATP28329 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CHATP28329 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHATP28329 ALOX12P2-203ENST00000570921 1945 ntBASIC14.33□□□□□ -0.11
CHATP28329 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CHATP28329 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.33□□□□□ -0.12
CHATP28329 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.33□□□□□ -0.12
CHATP28329 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.33□□□□□ -0.12
CHATP28329 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.33□□□□□ -0.12
CHATP28329 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 AP002414.4-201ENST00000589764 1148 ntBASIC14.33□□□□□ -0.12
CHATP28329 AC073592.4-201ENST00000623827 446 ntBASIC14.33□□□□□ -0.12
CHATP28329 AL358472.4-201ENST00000633140 710 ntBASIC14.33□□□□□ -0.12
CHATP28329 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CHATP28329 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.33□□□□□ -0.12
CHATP28329 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHATP28329 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHATP28329 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHATP28329 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHATP28329 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms