Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PDGFRAP16234 IGLL3P-201ENST00000412472 434 ntBASIC17.57■□□□□ 0.4
PDGFRAP16234 HCG4B-203ENST00000450128 991 ntBASIC17.57■□□□□ 0.4
PDGFRAP16234 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFRAP16234 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.57■□□□□ 0.4
PDGFRAP16234 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.57■□□□□ 0.4
PDGFRAP16234 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFRAP16234 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFRAP16234 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFRAP16234 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 KRT8P39-201ENST00000396270 1433 ntBASIC17.56■□□□□ 0.4
PDGFRAP16234 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.56■□□□□ 0.4
PDGFRAP16234 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.56■□□□□ 0.4
PDGFRAP16234 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.56■□□□□ 0.4
PDGFRAP16234 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 KRT18P2-201ENST00000447938 1258 ntBASIC17.56■□□□□ 0.4
PDGFRAP16234 PGAM5P1-201ENST00000518923 814 ntBASIC17.56■□□□□ 0.4
PDGFRAP16234 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.56■□□□□ 0.4
PDGFRAP16234 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.56■□□□□ 0.4
PDGFRAP16234 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.56■□□□□ 0.4
PDGFRAP16234 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
PDGFRAP16234 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.56■□□□□ 0.4
PDGFRAP16234 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 AC012569.1-201ENST00000591191 1524 ntBASIC17.56■□□□□ 0.4
PDGFRAP16234 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDGFRAP16234 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDGFRAP16234 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFRAP16234 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
PDGFRAP16234 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.55■□□□□ 0.4
PDGFRAP16234 AL513480.1-201ENST00000451731 511 ntBASIC17.55■□□□□ 0.4
PDGFRAP16234 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.55■□□□□ 0.4
PDGFRAP16234 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.55■□□□□ 0.4
PDGFRAP16234 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.55■□□□□ 0.4
PDGFRAP16234 AC023511.2-201ENST00000618803 211 ntBASIC17.55■□□□□ 0.4
PDGFRAP16234 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFRAP16234 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDGFRAP16234 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFRAP16234 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDGFRAP16234 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDGFRAP16234 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFRAP16234 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.54■□□□□ 0.4
PDGFRAP16234 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFRAP16234 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms