Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL096865.1-201ENST00000606796 927 ntBASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 Z92544.3-201ENST00000624747 417 ntBASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 OR6D1P-203ENST00000641209 4860 ntBASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40ALP0C0E4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 TNRC18P3-201ENST00000441896 2691 ntBASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 AC069262.1-201ENST00000539058 672 ntBASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 AC008267.7-201ENST00000624570 1194 ntBASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 FRMD8P1-201ENST00000440433 1524 ntBASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 NKILA-202ENST00000614771 2598 ntBASIC15.76■□□□□ 0.11
RAB40ALP0C0E4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 UXT-AS1-201ENST00000590504 1525 ntBASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 GPS2P2-201ENST00000430745 888 ntBASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40ALP0C0E4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms