Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.52■□□□□ 0.56
TPM1P09493 LINC01238-205ENST00000567549 1107 ntBASIC18.52■□□□□ 0.56
TPM1P09493 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 AC011467.2-201ENST00000598425 242 ntBASIC18.52■□□□□ 0.56
TPM1P09493 AL365203.3-201ENST00000609742 2057 ntBASIC18.52■□□□□ 0.56
TPM1P09493 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TPM1P09493 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM1P09493 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TPM1P09493 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TPM1P09493 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.52■□□□□ 0.55
TPM1P09493 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM1P09493 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.52■□□□□ 0.55
TPM1P09493 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 MTHFR-217ENST00000641820 1569 ntBASIC18.51■□□□□ 0.55
TPM1P09493 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 SIGLEC30P-201ENST00000455569 941 ntBASIC18.51■□□□□ 0.55
TPM1P09493 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.51■□□□□ 0.55
TPM1P09493 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.51■□□□□ 0.55
TPM1P09493 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM1P09493 AC011498.5-201ENST00000592027 486 ntBASIC18.51■□□□□ 0.55
TPM1P09493 AC012306.2-201ENST00000609350 630 ntBASIC18.51■□□□□ 0.55
TPM1P09493 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 AC006011.2-201ENST00000621313 1158 ntBASIC18.51■□□□□ 0.55
TPM1P09493 LINC00895-201ENST00000629028 1637 ntBASIC18.51■□□□□ 0.55
TPM1P09493 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TPM1P09493 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM1P09493 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TPM1P09493 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM1P09493 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TPM1P09493 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TPM1P09493 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM1P09493 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM1P09493 ME2P1-201ENST00000426028 1970 ntBASIC18.5■□□□□ 0.55
TPM1P09493 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TPM1P09493 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 KRT8P26-201ENST00000534154 1276 ntBASIC18.5■□□□□ 0.55
TPM1P09493 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM1P09493 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM1P09493 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM1P09493 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM1P09493 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TPM1P09493 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
TPM1P09493 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TPM1P09493 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TPM1P09493 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM1P09493 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM1P09493 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM1P09493 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM1P09493 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM1P09493 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TPM1P09493 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TPM1P09493 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms