Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
CAPN1P07384 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CAPN1P07384 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 AC018695.7-201ENST00000624587 2492 ntBASIC16.54■□□□□ 0.24
CAPN1P07384 AL645728.1-201ENST00000366221 2101 ntBASIC16.54■□□□□ 0.24
CAPN1P07384 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CAPN1P07384 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CAPN1P07384 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 TUBB8P12-201ENST00000308911 1335 ntBASIC16.53■□□□□ 0.24
CAPN1P07384 TUBB7P-202ENST00000428444 1305 ntBASIC16.53■□□□□ 0.24
CAPN1P07384 TUBB8P7-204ENST00000567960 1332 ntBASIC16.53■□□□□ 0.24
CAPN1P07384 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN1P07384 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN1P07384 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN1P07384 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 AC009947.1-201ENST00000444350 727 ntBASIC16.53■□□□□ 0.24
CAPN1P07384 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.53■□□□□ 0.24
CAPN1P07384 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.53■□□□□ 0.24
CAPN1P07384 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN1P07384 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CAPN1P07384 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN1P07384 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN1P07384 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CAPN1P07384 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN1P07384 LINC00982-205ENST00000420957 435 ntBASIC16.52■□□□□ 0.24
CAPN1P07384 MED15P5-201ENST00000423150 992 ntBASIC16.52■□□□□ 0.24
CAPN1P07384 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN1P07384 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.52■□□□□ 0.24
CAPN1P07384 AC006557.2-201ENST00000592985 1240 ntBASIC16.52■□□□□ 0.24
CAPN1P07384 AL589182.2-201ENST00000619332 1049 ntBASIC16.52■□□□□ 0.24
CAPN1P07384 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN1P07384 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN1P07384 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
CAPN1P07384 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CAPN1P07384 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CAPN1P07384 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN1P07384 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms