Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF253O75346 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 KRT18P38-201ENST00000449496 1282 ntBASIC13.12□□□□□ -0.31
ZNF253O75346 AC092647.4-201ENST00000457211 535 ntBASIC13.12□□□□□ -0.31
ZNF253O75346 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF253O75346 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF253O75346 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.12□□□□□ -0.31
ZNF253O75346 AC090616.6-201ENST00000582640 721 ntBASIC13.12□□□□□ -0.31
ZNF253O75346 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF253O75346 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.12□□□□□ -0.31
ZNF253O75346 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF253O75346 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF253O75346 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF253O75346 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ZNF253O75346 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 AC246785.2-201ENST00000432512 513 ntBASIC13.11□□□□□ -0.31
ZNF253O75346 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 AC093827.2-201ENST00000512654 315 ntBASIC13.11□□□□□ -0.31
ZNF253O75346 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.11□□□□□ -0.31
ZNF253O75346 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ZNF253O75346 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF253O75346 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF253O75346 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF253O75346 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 GPR89P-201ENST00000407924 1495 ntBASIC13.1□□□□□ -0.31
ZNF253O75346 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
ZNF253O75346 AC092171.3-201ENST00000610122 2651 ntBASIC13.1□□□□□ -0.31
ZNF253O75346 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF253O75346 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF253O75346 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF253O75346 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF253O75346 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF253O75346 AC003669.1-201ENST00000334569 611 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms