Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF40O75150 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF40O75150 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF40O75150 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF40O75150 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF40O75150 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF40O75150 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF40O75150 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF40O75150 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF40O75150 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RNF40O75150 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF40O75150 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 AC078925.2-201ENST00000624013 1973 ntBASIC18.14■□□□□ 0.49
RNF40O75150 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF40O75150 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF40O75150 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF40O75150 UNC93B6-202ENST00000528242 690 ntBASIC18.14■□□□□ 0.49
RNF40O75150 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF40O75150 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RNF40O75150 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RNF40O75150 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF40O75150 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF40O75150 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF40O75150 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF40O75150 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF40O75150 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
RNF40O75150 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 AC007967.3-201ENST00000434308 558 ntBASIC18.13■□□□□ 0.49
RNF40O75150 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.13■□□□□ 0.49
RNF40O75150 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF40O75150 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF40O75150 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF40O75150 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF40O75150 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF40O75150 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms