Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC005412.3-201ENST00000580309 715 ntBASIC16.62■□□□□ 0.25
PCDHGA12O60330 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 AF228730.6-201ENST00000641497 218 ntBASIC16.62■□□□□ 0.25
PCDHGA12O60330 AC084121.3-201ENST00000641716 218 ntBASIC16.62■□□□□ 0.25
PCDHGA12O60330 AC105233.6-201ENST00000642093 218 ntBASIC16.62■□□□□ 0.25
PCDHGA12O60330 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGA12O60330 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGA12O60330 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 AC107890.1-201ENST00000422478 521 ntBASIC16.61■□□□□ 0.25
PCDHGA12O60330 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 DUX4L17-201ENST00000557360 1267 ntBASIC16.61■□□□□ 0.25
PCDHGA12O60330 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA12O60330 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA12O60330 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 MIR943-201ENST00000401286 94 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 SPCS2P4-201ENST00000436160 681 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AC087641.1-201ENST00000557561 1021 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AC140878.1-201ENST00000565277 250 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AC084121.4-201ENST00000641598 221 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 AF228730.8-201ENST00000642140 221 ntBASIC16.6■□□□□ 0.25
PCDHGA12O60330 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA12O60330 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA12O60330 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms