Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TP73-AS1-207ENST00000624167 988 ntBASIC14.88□□□□□ -0.03
SGCEO43556 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 UBALD1-205ENST00000590891 2641 ntBASIC14.88□□□□□ -0.03
SGCEO43556 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SGCEO43556 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
SGCEO43556 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.88□□□□□ -0.03
SGCEO43556 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SGCEO43556 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SGCEO43556 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 AC006504.4-201ENST00000592118 1568 ntBASIC14.87□□□□□ -0.03
SGCEO43556 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SGCEO43556 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
SGCEO43556 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 PTCHD3P3-201ENST00000403073 906 ntBASIC14.87□□□□□ -0.03
SGCEO43556 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 FAAHP1-202ENST00000446499 1238 ntBASIC14.87□□□□□ -0.03
SGCEO43556 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.87□□□□□ -0.03
SGCEO43556 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 DUX4L17-201ENST00000557360 1267 ntBASIC14.87□□□□□ -0.03
SGCEO43556 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.87□□□□□ -0.03
SGCEO43556 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
SGCEO43556 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
SGCEO43556 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SGCEO43556 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SGCEO43556 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SGCEO43556 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 PI4KAP1-204ENST00000612579 1703 ntBASIC14.86□□□□□ -0.03
SGCEO43556 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.86□□□□□ -0.03
SGCEO43556 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.86□□□□□ -0.03
SGCEO43556 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SGCEO43556 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 AGGF1P2-201ENST00000426656 2106 ntBASIC14.86□□□□□ -0.03
SGCEO43556 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SGCEO43556 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.86□□□□□ -0.03
SGCEO43556 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SGCEO43556 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SGCEO43556 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms