Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SRGAP3O43295 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.73■□□□□ 0.91
SRGAP3O43295 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SRGAP3O43295 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 AC211486.1-202ENST00000416371 468 ntBASIC20.73■□□□□ 0.91
SRGAP3O43295 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
SRGAP3O43295 AL671277.1-201ENST00000429656 993 ntBASIC20.73■□□□□ 0.91
SRGAP3O43295 AC211476.1-201ENST00000503899 468 ntBASIC20.73■□□□□ 0.91
SRGAP3O43295 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.73■□□□□ 0.91
SRGAP3O43295 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.73■□□□□ 0.91
SRGAP3O43295 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SRGAP3O43295 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SRGAP3O43295 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SRGAP3O43295 AC006538.3-201ENST00000612495 578 ntBASIC20.73■□□□□ 0.91
SRGAP3O43295 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 AL161645.1-201ENST00000622716 1255 ntBASIC20.73■□□□□ 0.91
SRGAP3O43295 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SRGAP3O43295 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.73■□□□□ 0.91
SRGAP3O43295 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRGAP3O43295 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.72■□□□□ 0.91
SRGAP3O43295 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.72■□□□□ 0.91
SRGAP3O43295 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 AC134684.3-201ENST00000641758 218 ntBASIC20.72■□□□□ 0.91
SRGAP3O43295 AC016027.1-202ENST00000607927 1699 ntBASIC20.72■□□□□ 0.91
SRGAP3O43295 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SRGAP3O43295 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
SRGAP3O43295 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRGAP3O43295 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SRGAP3O43295 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.71■□□□□ 0.91
SRGAP3O43295 GGT4P-201ENST00000623672 1708 ntBASIC20.71■□□□□ 0.91
SRGAP3O43295 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.71■□□□□ 0.91
SRGAP3O43295 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.71■□□□□ 0.91
SRGAP3O43295 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SRGAP3O43295 RARRES2P8-201ENST00000566335 367 ntBASIC20.71■□□□□ 0.91
SRGAP3O43295 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.71■□□□□ 0.91
SRGAP3O43295 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.71■□□□□ 0.91
SRGAP3O43295 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
SRGAP3O43295 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SRGAP3O43295 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SRGAP3O43295 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms