Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.87■□□□□ 0.45
O00370 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
O00370 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.87■□□□□ 0.45
O00370 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
O00370 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
O00370 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.87■□□□□ 0.45
O00370 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 AL662844.4-201ENST00000606367 2838 ntBASIC17.86■□□□□ 0.45
O00370 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.86■□□□□ 0.45
O00370 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 MIR574-201ENST00000385209 96 ntBASIC17.86■□□□□ 0.45
O00370 MED15P5-201ENST00000423150 992 ntBASIC17.86■□□□□ 0.45
O00370 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.86■□□□□ 0.45
O00370 AC018845.2-201ENST00000568326 409 ntBASIC17.86■□□□□ 0.45
O00370 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.86■□□□□ 0.45
O00370 AL671883.3-201ENST00000603274 991 ntBASIC17.86■□□□□ 0.45
O00370 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.86■□□□□ 0.45
O00370 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.86■□□□□ 0.45
O00370 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.86■□□□□ 0.45
O00370 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
O00370 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
O00370 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.86■□□□□ 0.45
O00370 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.86■□□□□ 0.45
O00370 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.86■□□□□ 0.45
O00370 AL603756.1-201ENST00000606511 2163 ntBASIC17.86■□□□□ 0.45
O00370 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
O00370 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
O00370 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
O00370 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.85■□□□□ 0.45
O00370 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.85■□□□□ 0.45
O00370 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.85■□□□□ 0.45
O00370 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.85■□□□□ 0.45
O00370 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
O00370 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.85■□□□□ 0.45
O00370 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 KRT18P3-201ENST00000451602 1288 ntBASIC17.85■□□□□ 0.45
O00370 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.85■□□□□ 0.45
O00370 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
O00370 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
O00370 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.85■□□□□ 0.45
O00370 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.85■□□□□ 0.45
O00370 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.85■□□□□ 0.45
O00370 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.85■□□□□ 0.45
O00370 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
O00370 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
O00370 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.85■□□□□ 0.45
O00370 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
O00370 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
O00370 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.84■□□□□ 0.45
O00370 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
O00370 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 SNX33P1-201ENST00000592116 1762 ntBASIC17.84■□□□□ 0.45
O00370 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
O00370 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
O00370 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
O00370 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
O00370 HCG4-201ENST00000418983 998 ntBASIC17.84■□□□□ 0.45
O00370 AL513480.1-201ENST00000451731 511 ntBASIC17.84■□□□□ 0.45
O00370 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.84■□□□□ 0.45
O00370 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
O00370 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.84■□□□□ 0.45
O00370 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.84■□□□□ 0.45
O00370 MIR4515-201ENST00000584082 81 ntBASIC17.84■□□□□ 0.45
O00370 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.84■□□□□ 0.45
O00370 CYP2A7P1-201ENST00000595391 815 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms