Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 Z83836.1-201ENST00000624605 1642 ntBASIC16.01■□□□□ 0.15
PDLIM1O00151 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDLIM1O00151 UPK3BP1-201ENST00000428678 509 ntBASIC16.01■□□□□ 0.15
PDLIM1O00151 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.01■□□□□ 0.15
PDLIM1O00151 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 KRT8P26-201ENST00000534154 1276 ntBASIC16.01■□□□□ 0.15
PDLIM1O00151 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDLIM1O00151 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.01■□□□□ 0.15
PDLIM1O00151 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM1O00151 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.01■□□□□ 0.15
PDLIM1O00151 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM1O00151 EGFEM1P-202ENST00000431685 1563 ntBASIC16■□□□□ 0.15
PDLIM1O00151 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 TSPY22P-201ENST00000427496 604 ntBASIC16■□□□□ 0.15
PDLIM1O00151 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16■□□□□ 0.15
PDLIM1O00151 AC004263.2-201ENST00000617183 678 ntBASIC16■□□□□ 0.15
PDLIM1O00151 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 AP002414.2-201ENST00000591780 3365 ntBASIC16■□□□□ 0.15
PDLIM1O00151 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 AL359258.3-201ENST00000622910 2331 ntBASIC16■□□□□ 0.15
PDLIM1O00151 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDLIM1O00151 AC016734.2-201ENST00000624325 1377 ntBASIC16■□□□□ 0.15
PDLIM1O00151 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM1O00151 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM1O00151 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.99■□□□□ 0.15
PDLIM1O00151 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PDLIM1O00151 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms