Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TVP23AA6NH52 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TVP23AA6NH52 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TVP23AA6NH52 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TVP23AA6NH52 AC026691.1-201ENST00000602502 2017 ntBASIC15.02□□□□□ -0.01
TVP23AA6NH52 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.02□□□□□ -0.01
TVP23AA6NH52 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TVP23AA6NH52 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TVP23AA6NH52 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.02□□□□□ -0.01
TVP23AA6NH52 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 KRT8P49-201ENST00000604166 1432 ntBASIC15.01□□□□□ -0.01
TVP23AA6NH52 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 AL022326.1-202ENST00000641533 845 ntBASIC15.01□□□□□ -0.01
TVP23AA6NH52 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LINC00895-201ENST00000629028 1637 ntBASIC15.01□□□□□ -0.01
TVP23AA6NH52 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CYP2T1P-202ENST00000641596 2535 ntBASIC15.01□□□□□ -0.01
TVP23AA6NH52 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 PCDHA1-201ENST00000378133 2726 ntBASIC15.01□□□□□ -0.01
TVP23AA6NH52 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TVP23AA6NH52 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TVP23AA6NH52 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 NCF1C-201ENST00000438382 1427 ntBASIC15□□□□□ -0.01
TVP23AA6NH52 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TVP23AA6NH52 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TVP23AA6NH52 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15□□□□□ -0.01
TVP23AA6NH52 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 PRYP5-201ENST00000451909 266 ntBASIC15□□□□□ -0.01
TVP23AA6NH52 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15□□□□□ -0.01
TVP23AA6NH52 AC106795.1-205ENST00000512851 1056 ntBASIC15□□□□□ -0.01
TVP23AA6NH52 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 MTDHP3-201ENST00000594186 672 ntBASIC15□□□□□ -0.01
TVP23AA6NH52 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15□□□□□ -0.01
TVP23AA6NH52 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15□□□□□ -0.01
TVP23AA6NH52 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TVP23AA6NH52 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TVP23AA6NH52 AL356309.3-201ENST00000624132 1934 ntBASIC15□□□□□ -0.01
TVP23AA6NH52 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15□□□□□ -0.01
TVP23AA6NH52 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
TVP23AA6NH52 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms