Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 GGT4P-201ENST00000623672 1708 ntBASIC15.91■□□□□ 0.14
AP4S1Q9Y587 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4S1Q9Y587 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AC092666.2-201ENST00000613287 246 ntBASIC15.9■□□□□ 0.14
AP4S1Q9Y587 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 AC009336.1-201ENST00000608941 1553 ntBASIC15.9■□□□□ 0.14
AP4S1Q9Y587 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4S1Q9Y587 TNRC18P2-201ENST00000417666 2714 ntBASIC15.89■□□□□ 0.13
AP4S1Q9Y587 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AC002310.6-201ENST00000624451 1377 ntBASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ECEL1P3-201ENST00000427961 737 ntBASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 FAM87A-204ENST00000613235 858 ntBASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 AC006449.6-201ENST00000612330 2296 ntBASIC15.89■□□□□ 0.13
AP4S1Q9Y587 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP4S1Q9Y587 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms