Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 KRT8P48-201ENST00000515599 1220 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 AC051619.7-201ENST00000568314 623 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 RN7SL204P-201ENST00000582831 262 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 PCDHB19P-201ENST00000570871 2371 ntBASIC18.1■□□□□ 0.49
USP15Q9Y4E8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP15Q9Y4E8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 MIR661-201ENST00000384842 89 ntBASIC18.09■□□□□ 0.49
USP15Q9Y4E8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 TSPY16P-201ENST00000449843 468 ntBASIC18.09■□□□□ 0.49
USP15Q9Y4E8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP15Q9Y4E8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 AC011270.2-201ENST00000624293 2550 ntBASIC18.08■□□□□ 0.49
USP15Q9Y4E8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 AC100803.2-201ENST00000562459 1963 ntBASIC18.08■□□□□ 0.49
USP15Q9Y4E8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.08■□□□□ 0.49
USP15Q9Y4E8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms