Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 PGAM1P5-201ENST00000548011 764 ntBASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 AC134915.1-201ENST00000426461 574 ntBASIC26■■□□□ 1.75
RIMBP3Q9UFD9 HOMER2P2-201ENST00000451621 847 ntBASIC26■■□□□ 1.75
RIMBP3Q9UFD9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 AL031598.1-201ENST00000561511 1773 ntBASIC26■■□□□ 1.75
RIMBP3Q9UFD9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC26■■□□□ 1.75
RIMBP3Q9UFD9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 PC-204ENST00000524491 1714 ntTSL 2 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 LYSMD4-203ENST00000378904 2122 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 C2orf27AP3-201ENST00000434123 579 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AC093433.1-201ENST00000458048 571 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 SUPT4H1P2-201ENST00000501248 353 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AC025279.2-201ENST00000569730 653 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 AL354718.3-201ENST00000616414 581 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 CR382287.1-201ENST00000623954 586 ntBASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RIMBP3Q9UFD9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 HSPB1P2-201ENST00000448722 546 ntBASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 CTBP2P4-201ENST00000513884 920 ntBASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AC078819.1-201ENST00000547454 765 ntBASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AC012085.1-201ENST00000548270 765 ntBASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RIMBP3Q9UFD9 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
RIMBP3Q9UFD9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RIMBP3Q9UFD9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.97■■□□□ 1.75
RIMBP3Q9UFD9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms