Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC104596.2-201ENST00000512793 793 ntBASIC15.31■□□□□ 0.04
CHD8Q9HCK8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC021097.1-201ENST00000607902 574 ntBASIC15.31■□□□□ 0.04
CHD8Q9HCK8 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 MSTO2P-201ENST00000314835 1709 ntBASIC15.31■□□□□ 0.04
CHD8Q9HCK8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.31■□□□□ 0.04
CHD8Q9HCK8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 RNA5SP410-201ENST00000516285 106 ntBASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 RN7SL818P-201ENST00000485099 259 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AC036164.1-201ENST00000570544 333 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 EEF1DP1-201ENST00000585891 896 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 RN7SL725P-201ENST00000606439 259 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AC091812.3-201ENST00000621362 345 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 AL353726.2-201ENST00000623259 884 ntBASIC15.3■□□□□ 0.04
CHD8Q9HCK8 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.3■□□□□ 0.04
CHD8Q9HCK8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 AL442647.2-201ENST00000429864 857 ntBASIC15.29■□□□□ 0.04
CHD8Q9HCK8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.29■□□□□ 0.04
CHD8Q9HCK8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms