Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC119751.2-201ENST00000504529 210 ntBASIC28.54■■■□□ 2.16
TRIM41Q8WV44 AC106886.1-201ENST00000568660 600 ntBASIC28.54■■■□□ 2.16
TRIM41Q8WV44 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM41Q8WV44 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM41Q8WV44 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM41Q8WV44 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM41Q8WV44 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 KRT8P49-201ENST00000604166 1432 ntBASIC28.53■■■□□ 2.16
TRIM41Q8WV44 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 AC140658.5-201ENST00000438532 169 ntBASIC28.53■■■□□ 2.16
TRIM41Q8WV44 GOLGA2P4-201ENST00000441462 777 ntBASIC28.53■■■□□ 2.16
TRIM41Q8WV44 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 TSFM-210ENST00000550559 897 ntTSL 5 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 AC244093.1-201ENST00000610837 814 ntBASIC28.53■■■□□ 2.16
TRIM41Q8WV44 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC28.53■■■□□ 2.16
TRIM41Q8WV44 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 POLE2-203ENST00000553805 496 ntTSL 2 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 MIR6869-201ENST00000619434 62 ntBASIC28.52■■■□□ 2.16
TRIM41Q8WV44 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 AC012569.1-201ENST00000591191 1524 ntBASIC28.52■■■□□ 2.16
TRIM41Q8WV44 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM41Q8WV44 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 MPDU1-223ENST00000582151 728 ntBASIC28.51■■■□□ 2.15
TRIM41Q8WV44 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM41Q8WV44 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 RPL28-204ENST00000431533 590 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC241585.1-201ENST00000433527 519 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SPDYE11-202ENST00000450699 704 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC112191.1-201ENST00000523689 701 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 FOS-206ENST00000555347 1280 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SPDYE9P-201ENST00000570642 692 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC091167.2-201ENST00000579581 588 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC103810.3-201ENST00000583567 96 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AC026740.1-201ENST00000607068 791 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SPDYE10P-202ENST00000612005 668 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 SPDYE8P-202ENST00000612377 668 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AL109936.8-201ENST00000641772 604 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AL021920.2-201ENST00000624828 1351 ntBASIC28.5■■■□□ 2.15
TRIM41Q8WV44 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 THTPA-204ENST00000554970 569 ntTSL 4 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 THTPA-206ENST00000556015 535 ntTSL 3 BASIC28.49■■■□□ 2.15
TRIM41Q8WV44 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms