Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTRT1Q8TDG2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 POU5F1P6-201ENST00000466990 990 ntBASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 HYMAI-201ENST00000635591 3347 ntBASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 AP005117.1-202ENST00000581724 1908 ntBASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ACTRT1Q8TDG2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 PAWRP1-201ENST00000451083 565 ntBASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 LINC01144-201ENST00000626198 1710 ntBASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTRT1Q8TDG2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.46■□□□□ 0.38
ACTRT1Q8TDG2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms