Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 PMS2P2-201ENST00000425039 1128 ntBASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 SNHG9-202ENST00000564014 471 ntBASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 MST1L-201ENST00000442552 2185 ntBASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDND2Q8NHS1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 CEND1P1-201ENST00000451006 455 ntBASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 AC074386.1-202ENST00000463561 864 ntBASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 ELL2P1-201ENST00000413990 1906 ntBASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDND2Q8NHS1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 LYSMD4-203ENST00000378904 2122 ntBASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 PAWRP1-201ENST00000451083 565 ntBASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDND2Q8NHS1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms