Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AC005412.3-201ENST00000580309 715 ntBASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 AC009093.7-201ENST00000623853 1223 ntBASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.32■□□□□ 0.36
PHTF2Q8N3S3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 AC243562.1-201ENST00000560672 389 ntBASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 PCDHA14-201ENST00000506751 2298 ntBASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PHTF2Q8N3S3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHTF2Q8N3S3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms