Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.72■□□□□ 0.27
APLFQ8IW19 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
APLFQ8IW19 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
APLFQ8IW19 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.72■□□□□ 0.27
APLFQ8IW19 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
APLFQ8IW19 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APLFQ8IW19 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
APLFQ8IW19 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
APLFQ8IW19 BX842568.4-201ENST00000421222 227 ntBASIC16.71■□□□□ 0.27
APLFQ8IW19 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.71■□□□□ 0.27
APLFQ8IW19 ABCD1P5-201ENST00000445663 754 ntBASIC16.71■□□□□ 0.27
APLFQ8IW19 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.71■□□□□ 0.27
APLFQ8IW19 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.71■□□□□ 0.27
APLFQ8IW19 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.71■□□□□ 0.27
APLFQ8IW19 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.71■□□□□ 0.27
APLFQ8IW19 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.71■□□□□ 0.27
APLFQ8IW19 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
APLFQ8IW19 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.71■□□□□ 0.27
APLFQ8IW19 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
APLFQ8IW19 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APLFQ8IW19 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
APLFQ8IW19 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.71■□□□□ 0.26
APLFQ8IW19 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
APLFQ8IW19 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
APLFQ8IW19 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
APLFQ8IW19 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APLFQ8IW19 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.7■□□□□ 0.26
APLFQ8IW19 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.7■□□□□ 0.26
APLFQ8IW19 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APLFQ8IW19 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
APLFQ8IW19 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.7■□□□□ 0.26
APLFQ8IW19 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.69■□□□□ 0.26
APLFQ8IW19 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 IGHV3-22-201ENST00000520721 359 ntBASIC16.69■□□□□ 0.26
APLFQ8IW19 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms