Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC093726.1-201ENST00000608064 963 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 MIR4492-201ENST00000581627 80 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC090164.3-201ENST00000610780 2143 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC099336.1-201ENST00000417053 1171 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AC011495.1-201ENST00000498085 584 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 AL033527.5-201ENST00000641382 801 ntBASIC11.49□□□□□ -0.57
CSMD3Q7Z407 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CSMD3Q7Z407 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 AC093525.9-201ENST00000624961 1746 ntBASIC11.48□□□□□ -0.57
CSMD3Q7Z407 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 KRT8P12-202ENST00000472924 1397 ntBASIC11.48□□□□□ -0.57
CSMD3Q7Z407 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CSMD3Q7Z407 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 EGFEM1P-202ENST00000431685 1563 ntBASIC11.47□□□□□ -0.57
CSMD3Q7Z407 TOP3BP1-201ENST00000420768 1380 ntBASIC11.47□□□□□ -0.57
CSMD3Q7Z407 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 AC104989.1-201ENST00000519711 778 ntBASIC11.47□□□□□ -0.57
CSMD3Q7Z407 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 MIR6727-201ENST00000620702 65 ntBASIC11.47□□□□□ -0.57
CSMD3Q7Z407 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.47□□□□□ -0.57
CSMD3Q7Z407 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms