Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 RAB43P1-201ENST00000561790 589 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 SRD5A3P1-201ENST00000603021 949 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 AC026979.3-201ENST00000607315 403 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 AL033527.5-202ENST00000641632 1098 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CNKSR3Q6P9H4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 MEP1AP4-201ENST00000423244 1087 ntBASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 SNX33P1-201ENST00000592116 1762 ntBASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 AC008764.6-201ENST00000595909 2069 ntBASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNKSR3Q6P9H4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 AC093724.1-201ENST00000448659 1027 ntBASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 SDHAP3-202ENST00000515467 728 ntBASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNKSR3Q6P9H4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 MIR658-201ENST00000385210 100 ntBASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 SPDYE17-201ENST00000412399 783 ntBASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 RN7SL837P-201ENST00000463010 287 ntBASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 TPRX2P-201ENST00000535362 881 ntBASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 AC099568.2-201ENST00000609194 695 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms