Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF549Q6P9A3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF549Q6P9A3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
ZNF549Q6P9A3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
ZNF549Q6P9A3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MRPL3P1-201ENST00000400109 1033 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 RNA5SP419-201ENST00000515908 135 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 AL160237.2-201ENST00000556165 472 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 AC091167.2-201ENST00000579581 588 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MIR1199-201ENST00000621445 119 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 AC117500.6-201ENST00000624871 588 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF549Q6P9A3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AC108073.2-201ENST00000464002 357 ntBASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF549Q6P9A3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms