Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AL662844.4-201ENST00000606367 2838 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 RNU1-129P-201ENST00000384064 167 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 U1.21-201ENST00000580816 167 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC023141.13-201ENST00000604991 943 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC027601.4-201ENST00000611259 610 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC004877.2-201ENST00000623941 599 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 AC025580.3-201ENST00000617932 1424 ntBASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 AL022342.1-201ENST00000400363 863 ntBASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 MED15P5-201ENST00000423150 992 ntBASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 KRT19P2-202ENST00000557173 1012 ntBASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 BCAR1-209ENST00000546196 1340 ntBASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN20Q4JDL3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 KRT18P3-201ENST00000451602 1288 ntBASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms