Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.56□□□□□ -0.24
CX3CL1P78423 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 ELK2BP-201ENST00000415014 1224 ntBASIC13.56□□□□□ -0.24
CX3CL1P78423 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.56□□□□□ -0.24
CX3CL1P78423 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.56□□□□□ -0.24
CX3CL1P78423 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.56□□□□□ -0.24
CX3CL1P78423 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.56□□□□□ -0.24
CX3CL1P78423 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 AC008735.5-201ENST00000623544 497 ntBASIC13.56□□□□□ -0.24
CX3CL1P78423 AC148477.8-201ENST00000624298 468 ntBASIC13.56□□□□□ -0.24
CX3CL1P78423 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.56□□□□□ -0.24
CX3CL1P78423 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
CX3CL1P78423 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 AC243591.1-201ENST00000452967 1364 ntBASIC13.56□□□□□ -0.24
CX3CL1P78423 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CX3CL1P78423 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CL1P78423 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 AP002414.1-201ENST00000391405 1147 ntBASIC13.55□□□□□ -0.24
CX3CL1P78423 PTCHD3P3-201ENST00000403073 906 ntBASIC13.55□□□□□ -0.24
CX3CL1P78423 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CX3CL1P78423 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.55□□□□□ -0.24
CX3CL1P78423 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.55□□□□□ -0.24
CX3CL1P78423 AC105339.3-201ENST00000560043 636 ntBASIC13.55□□□□□ -0.24
CX3CL1P78423 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.55□□□□□ -0.24
CX3CL1P78423 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 AL773604.1-201ENST00000617417 272 ntBASIC13.55□□□□□ -0.24
CX3CL1P78423 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CX3CL1P78423 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CX3CL1P78423 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CX3CL1P78423 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CX3CL1P78423 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms