Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRAMEP78395 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEP78395 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEP78395 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEP78395 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 MIR1199-201ENST00000621445 119 ntBASIC16.96■□□□□ 0.31
PRAMEP78395 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEP78395 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRAMEP78395 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.96■□□□□ 0.3
PRAMEP78395 PKD1P5-201ENST00000532415 10291 ntBASIC16.96■□□□□ 0.3
PRAMEP78395 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
PRAMEP78395 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.96■□□□□ 0.3
PRAMEP78395 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PRAMEP78395 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 AC092171.3-201ENST00000610122 2651 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 AL603756.1-201ENST00000606511 2163 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 AL450487.1-201ENST00000426799 995 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 AC087163.2-201ENST00000457299 853 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.95■□□□□ 0.3
PRAMEP78395 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.95■□□□□ 0.3
PRAMEP78395 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.95■□□□□ 0.3
PRAMEP78395 RN7SL510P-201ENST00000581311 263 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PRAMEP78395 AL691432.3-201ENST00000621860 400 ntBASIC16.95■□□□□ 0.3
PRAMEP78395 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEP78395 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PRAMEP78395 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEP78395 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEP78395 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEP78395 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 TOP3BP1-201ENST00000420768 1380 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PRAMEP78395 RPS2P28-201ENST00000314255 741 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 KRT18P67-201ENST00000432816 1264 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 RPS15P9-201ENST00000494093 319 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PRAMEP78395 AC136632.2-201ENST00000512891 861 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.94■□□□□ 0.3
PRAMEP78395 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.94■□□□□ 0.3
PRAMEP78395 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.94■□□□□ 0.3
PRAMEP78395 AC008735.5-201ENST00000623544 497 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms