Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC138932.1-201ENST00000534164 6830 ntBASIC13.67□□□□□ -0.22
LMO4P61968 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO4P61968 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LMO4P61968 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO4P61968 MIR661-201ENST00000384842 89 ntBASIC13.67□□□□□ -0.22
LMO4P61968 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.67□□□□□ -0.22
LMO4P61968 AC241585.1-201ENST00000433527 519 ntBASIC13.67□□□□□ -0.22
LMO4P61968 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.67□□□□□ -0.22
LMO4P61968 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.67□□□□□ -0.22
LMO4P61968 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 AC027369.6-201ENST00000525520 931 ntBASIC13.67□□□□□ -0.22
LMO4P61968 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.67□□□□□ -0.22
LMO4P61968 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.67□□□□□ -0.22
LMO4P61968 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 RN7SL204P-201ENST00000582831 262 ntBASIC13.67□□□□□ -0.22
LMO4P61968 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
LMO4P61968 AC073592.8-201ENST00000624126 511 ntBASIC13.67□□□□□ -0.22
LMO4P61968 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 AC060834.1-201ENST00000443027 2032 ntBASIC13.67□□□□□ -0.22
LMO4P61968 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LMO4P61968 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO4P61968 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO4P61968 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.66□□□□□ -0.22
LMO4P61968 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 AC236430.1-201ENST00000402231 743 ntBASIC13.66□□□□□ -0.22
LMO4P61968 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO4P61968 AC002472.2-201ENST00000442739 958 ntBASIC13.66□□□□□ -0.22
LMO4P61968 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO4P61968 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO4P61968 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.66□□□□□ -0.22
LMO4P61968 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LMO4P61968 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LMO4P61968 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO4P61968 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LMO4P61968 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LMO4P61968 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.65□□□□□ -0.22
LMO4P61968 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.65□□□□□ -0.22
LMO4P61968 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.65□□□□□ -0.22
LMO4P61968 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.65□□□□□ -0.22
LMO4P61968 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms