Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VSX2P58304 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.05■□□□□ 0.16
VSX2P58304 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.05■□□□□ 0.16
VSX2P58304 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.05■□□□□ 0.16
VSX2P58304 AP002472.1-201ENST00000577490 586 ntBASIC16.05■□□□□ 0.16
VSX2P58304 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.05■□□□□ 0.16
VSX2P58304 AC091812.2-201ENST00000619081 385 ntBASIC16.05■□□□□ 0.16
VSX2P58304 AC055717.3-201ENST00000622967 595 ntBASIC16.05■□□□□ 0.16
VSX2P58304 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VSX2P58304 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSX2P58304 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
VSX2P58304 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
VSX2P58304 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VSX2P58304 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.04■□□□□ 0.16
VSX2P58304 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.04■□□□□ 0.16
VSX2P58304 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
VSX2P58304 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.04■□□□□ 0.16
VSX2P58304 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VSX2P58304 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.04■□□□□ 0.16
VSX2P58304 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
VSX2P58304 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VSX2P58304 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
VSX2P58304 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
VSX2P58304 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VSX2P58304 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
VSX2P58304 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.03■□□□□ 0.16
VSX2P58304 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.03■□□□□ 0.16
VSX2P58304 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.03■□□□□ 0.16
VSX2P58304 AC140658.5-201ENST00000438532 169 ntBASIC16.03■□□□□ 0.16
VSX2P58304 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
VSX2P58304 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.03■□□□□ 0.16
VSX2P58304 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.03■□□□□ 0.16
VSX2P58304 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
VSX2P58304 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.03■□□□□ 0.16
VSX2P58304 MIR4492-201ENST00000581627 80 ntBASIC16.03■□□□□ 0.16
VSX2P58304 MIR4469-201ENST00000583919 79 ntBASIC16.03■□□□□ 0.16
VSX2P58304 CYP2A7P1-201ENST00000595391 815 ntBASIC16.03■□□□□ 0.16
VSX2P58304 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
VSX2P58304 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VSX2P58304 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms