Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN20P56880 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLDN20P56880 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN20P56880 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN20P56880 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN20P56880 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN20P56880 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN20P56880 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN20P56880 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN20P56880 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 EGFEM1P-202ENST00000431685 1563 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN20P56880 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
CLDN20P56880 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN20P56880 POLD2P1-201ENST00000511220 997 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 KRT18P58-201ENST00000527480 1120 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN20P56880 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN20P56880 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN20P56880 GGTLC5P-201ENST00000617623 998 ntBASIC15.41■□□□□ 0.06
CLDN20P56880 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN20P56880 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN20P56880 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLDN20P56880 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN20P56880 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN20P56880 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN20P56880 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 MED15P5-201ENST00000423150 992 ntBASIC15.4■□□□□ 0.06
CLDN20P56880 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN20P56880 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN20P56880 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 AC027601.4-201ENST00000611259 610 ntBASIC15.4■□□□□ 0.06
CLDN20P56880 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.4■□□□□ 0.06
CLDN20P56880 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN20P56880 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN20P56880 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.39■□□□□ 0.06
CLDN20P56880 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN20P56880 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDN20P56880 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN20P56880 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms