Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.92■□□□□ 0.3
WNT3AP56704 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 ALOX12P2-203ENST00000570921 1945 ntBASIC16.92■□□□□ 0.3
WNT3AP56704 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.92■□□□□ 0.3
WNT3AP56704 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
WNT3AP56704 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
WNT3AP56704 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.92■□□□□ 0.3
WNT3AP56704 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.92■□□□□ 0.3
WNT3AP56704 SLC25A1P1-201ENST00000528351 927 ntBASIC16.92■□□□□ 0.3
WNT3AP56704 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
WNT3AP56704 AC096734.2-201ENST00000562054 433 ntBASIC16.92■□□□□ 0.3
WNT3AP56704 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
WNT3AP56704 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
WNT3AP56704 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
WNT3AP56704 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 PCDHB19P-201ENST00000570871 2371 ntBASIC16.91■□□□□ 0.3
WNT3AP56704 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.91■□□□□ 0.3
WNT3AP56704 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 AC120114.3-201ENST00000611923 658 ntBASIC16.91■□□□□ 0.3
WNT3AP56704 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT3AP56704 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT3AP56704 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT3AP56704 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.91■□□□□ 0.3
WNT3AP56704 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 CROCCP1-201ENST00000426910 5675 ntBASIC16.9■□□□□ 0.3
WNT3AP56704 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT3AP56704 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 AL031731.1-201ENST00000642131 2094 ntBASIC16.9■□□□□ 0.3
WNT3AP56704 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
WNT3AP56704 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.9■□□□□ 0.3
WNT3AP56704 HMGA1P7-201ENST00000406908 502 ntBASIC16.9■□□□□ 0.3
WNT3AP56704 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 AC007967.2-201ENST00000432613 625 ntBASIC16.9■□□□□ 0.3
WNT3AP56704 RHOQP3-201ENST00000437982 621 ntBASIC16.9■□□□□ 0.3
WNT3AP56704 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT3AP56704 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
WNT3AP56704 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms