Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 ARMC10P1-201ENST00000313754 855 ntBASIC15.68■□□□□ 0.1
CDH12P55289 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CDH12P55289 NUS1P2-201ENST00000417358 873 ntBASIC15.68■□□□□ 0.1
CDH12P55289 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH12P55289 NUS1P1-201ENST00000446295 882 ntBASIC15.68■□□□□ 0.1
CDH12P55289 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH12P55289 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH12P55289 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDH12P55289 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDH12P55289 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 AC005052.1-201ENST00000625181 2492 ntBASIC15.67■□□□□ 0.1
CDH12P55289 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CDH12P55289 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH12P55289 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 ABCD1P5-201ENST00000445663 754 ntBASIC15.67■□□□□ 0.1
CDH12P55289 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH12P55289 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.67■□□□□ 0.1
CDH12P55289 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH12P55289 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH12P55289 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH12P55289 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH12P55289 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH12P55289 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDH12P55289 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH12P55289 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH12P55289 ACTG1P4-201ENST00000425123 1122 ntBASIC15.66■□□□□ 0.1
CDH12P55289 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH12P55289 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 AC093458.2-201ENST00000623150 629 ntBASIC15.66■□□□□ 0.1
CDH12P55289 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms