Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA4P54764 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.11■□□□□ 0.17
EPHA4P54764 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EPHA4P54764 FAM58DP-201ENST00000428076 619 ntBASIC16.11■□□□□ 0.17
EPHA4P54764 GPS2P2-201ENST00000430745 888 ntBASIC16.11■□□□□ 0.17
EPHA4P54764 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHA4P54764 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.11■□□□□ 0.17
EPHA4P54764 AC027307.2-201ENST00000591252 911 ntBASIC16.11■□□□□ 0.17
EPHA4P54764 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHA4P54764 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA4P54764 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA4P54764 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
EPHA4P54764 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA4P54764 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA4P54764 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHA4P54764 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHA4P54764 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
EPHA4P54764 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 MIR346-201ENST00000362234 95 ntBASIC16.1■□□□□ 0.17
EPHA4P54764 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHA4P54764 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 MIR770-201ENST00000390219 98 ntBASIC16.1■□□□□ 0.17
EPHA4P54764 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.1■□□□□ 0.17
EPHA4P54764 RBPMS2P1-201ENST00000437762 623 ntBASIC16.1■□□□□ 0.17
EPHA4P54764 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHA4P54764 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHA4P54764 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.1■□□□□ 0.17
EPHA4P54764 AP000842.3-202ENST00000569238 1080 ntBASIC16.1■□□□□ 0.17
EPHA4P54764 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 Z92544.3-201ENST00000624747 417 ntBASIC16.1■□□□□ 0.17
EPHA4P54764 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EPHA4P54764 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
EPHA4P54764 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
EPHA4P54764 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHA4P54764 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.1■□□□□ 0.17
EPHA4P54764 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHA4P54764 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 AC092053.1-201ENST00000605787 1936 ntBASIC16.09■□□□□ 0.17
EPHA4P54764 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EPHA4P54764 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHA4P54764 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 SPDYE7P-202ENST00000420373 878 ntBASIC16.09■□□□□ 0.17
EPHA4P54764 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 AC069262.1-201ENST00000539058 672 ntBASIC16.09■□□□□ 0.17
EPHA4P54764 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.09■□□□□ 0.17
EPHA4P54764 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 AC093512.1-201ENST00000617969 520 ntBASIC16.09■□□□□ 0.17
EPHA4P54764 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHA4P54764 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHA4P54764 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHA4P54764 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHA4P54764 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EPHA4P54764 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHA4P54764 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHA4P54764 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHA4P54764 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHA4P54764 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms