Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 AC148477.5-201ENST00000625164 1645 ntBASIC17.19■□□□□ 0.34
ATXN3P54252 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ATXN3P54252 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.19■□□□□ 0.34
ATXN3P54252 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.19■□□□□ 0.34
ATXN3P54252 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 AC023141.13-201ENST00000604991 943 ntBASIC17.19■□□□□ 0.34
ATXN3P54252 AC093512.1-201ENST00000617969 520 ntBASIC17.19■□□□□ 0.34
ATXN3P54252 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATXN3P54252 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.19■□□□□ 0.34
ATXN3P54252 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 AC025580.3-201ENST00000617932 1424 ntBASIC17.19■□□□□ 0.34
ATXN3P54252 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.19■□□□□ 0.34
ATXN3P54252 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATXN3P54252 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
ATXN3P54252 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.19■□□□□ 0.34
ATXN3P54252 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ATXN3P54252 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.18■□□□□ 0.34
ATXN3P54252 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 AC106886.4-201ENST00000623557 2502 ntBASIC17.18■□□□□ 0.34
ATXN3P54252 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.18■□□□□ 0.34
ATXN3P54252 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.18■□□□□ 0.34
ATXN3P54252 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ATXN3P54252 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.18■□□□□ 0.34
ATXN3P54252 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.18■□□□□ 0.34
ATXN3P54252 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 AL096865.1-201ENST00000606796 927 ntBASIC17.18■□□□□ 0.34
ATXN3P54252 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
ATXN3P54252 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATXN3P54252 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATXN3P54252 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATXN3P54252 AC093010.1-201ENST00000473625 1624 ntBASIC17.18■□□□□ 0.34
ATXN3P54252 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.17■□□□□ 0.34
ATXN3P54252 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ATXN3P54252 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
ATXN3P54252 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATXN3P54252 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.17■□□□□ 0.34
ATXN3P54252 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.17■□□□□ 0.34
ATXN3P54252 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
ATXN3P54252 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATXN3P54252 IGLL3P-201ENST00000412472 434 ntBASIC17.17■□□□□ 0.34
ATXN3P54252 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.17■□□□□ 0.34
ATXN3P54252 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.17■□□□□ 0.34
ATXN3P54252 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.17■□□□□ 0.34
ATXN3P54252 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms