Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.68■□□□□ 0.26
NUBP1P53384 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.67■□□□□ 0.26
NUBP1P53384 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 KLF2P4-201ENST00000451959 1225 ntBASIC16.67■□□□□ 0.26
NUBP1P53384 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 FO681548.1-201ENST00000455617 1132 ntBASIC16.67■□□□□ 0.26
NUBP1P53384 AC098859.1-201ENST00000502915 1238 ntBASIC16.67■□□□□ 0.26
NUBP1P53384 AC093801.2-201ENST00000503966 1050 ntBASIC16.67■□□□□ 0.26
NUBP1P53384 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC16.67■□□□□ 0.26
NUBP1P53384 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC16.67■□□□□ 0.26
NUBP1P53384 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
NUBP1P53384 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.67■□□□□ 0.26
NUBP1P53384 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUBP1P53384 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NUBP1P53384 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.66■□□□□ 0.26
NUBP1P53384 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
NUBP1P53384 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NUBP1P53384 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NUBP1P53384 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NUBP1P53384 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.66■□□□□ 0.26
NUBP1P53384 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NUBP1P53384 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NUBP1P53384 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.66■□□□□ 0.26
NUBP1P53384 FAM21FP-201ENST00000426241 1131 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 VN1R48P-201ENST00000448149 1036 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
NUBP1P53384 RHOQP1-201ENST00000555758 579 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 AC044860.1-202ENST00000559481 777 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 MTCYBP28-201ENST00000566728 1132 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.66■□□□□ 0.26
NUBP1P53384 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 AC004790.1-201ENST00000612686 536 ntBASIC16.66■□□□□ 0.26
NUBP1P53384 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.66■□□□□ 0.26
NUBP1P53384 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUBP1P53384 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NUBP1P53384 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 FOXO1B-201ENST00000504678 1527 ntBASIC16.65■□□□□ 0.26
NUBP1P53384 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NUBP1P53384 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUBP1P53384 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.65■□□□□ 0.26
NUBP1P53384 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms