Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.87□□□□□ -0.19
SNCAP37840 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.87□□□□□ -0.19
SNCAP37840 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 AC111152.3-201ENST00000569699 673 ntBASIC13.87□□□□□ -0.19
SNCAP37840 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.87□□□□□ -0.19
SNCAP37840 AL390719.2-201ENST00000606993 987 ntBASIC13.87□□□□□ -0.19
SNCAP37840 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.87□□□□□ -0.19
SNCAP37840 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.87□□□□□ -0.19
SNCAP37840 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNCAP37840 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.86□□□□□ -0.19
SNCAP37840 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 AC073912.3-201ENST00000624414 853 ntBASIC13.86□□□□□ -0.19
SNCAP37840 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 AC010460.3-201ENST00000511359 1579 ntBASIC13.86□□□□□ -0.19
SNCAP37840 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.86□□□□□ -0.19
SNCAP37840 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SNCAP37840 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNCAP37840 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.86□□□□□ -0.19
SNCAP37840 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.85□□□□□ -0.19
SNCAP37840 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.85□□□□□ -0.19
SNCAP37840 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms