Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
KCNA3P22001 AC233724.13-201ENST00000598383 410 ntBASIC20.27■□□□□ 0.84
KCNA3P22001 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KCNA3P22001 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNA3P22001 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KCNA3P22001 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
KCNA3P22001 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
KCNA3P22001 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNA3P22001 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.26■□□□□ 0.83
KCNA3P22001 RNA5SP412-201ENST00000516234 123 ntBASIC20.26■□□□□ 0.83
KCNA3P22001 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.26■□□□□ 0.83
KCNA3P22001 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNA3P22001 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNA3P22001 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNA3P22001 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNA3P22001 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNA3P22001 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCNA3P22001 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KCNA3P22001 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
KCNA3P22001 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.25■□□□□ 0.83
KCNA3P22001 KRT43P-201ENST00000434019 910 ntBASIC20.25■□□□□ 0.83
KCNA3P22001 CSF2RBP1-201ENST00000447905 391 ntBASIC20.25■□□□□ 0.83
KCNA3P22001 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNA3P22001 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.25■□□□□ 0.83
KCNA3P22001 AL139099.5-201ENST00000635274 300 ntBASIC20.25■□□□□ 0.83
KCNA3P22001 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
KCNA3P22001 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNA3P22001 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNA3P22001 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 CLK3P2-201ENST00000427566 1453 ntBASIC20.24■□□□□ 0.83
KCNA3P22001 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KCNA3P22001 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNA3P22001 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNA3P22001 KLF2P4-201ENST00000451959 1225 ntBASIC20.24■□□□□ 0.83
KCNA3P22001 ZNF767P-206ENST00000513792 565 ntBASIC20.24■□□□□ 0.83
KCNA3P22001 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNA3P22001 RARRES2P5-201ENST00000564013 466 ntBASIC20.24■□□□□ 0.83
KCNA3P22001 MIR6069-201ENST00000620069 79 ntBASIC20.24■□□□□ 0.83
KCNA3P22001 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KCNA3P22001 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNA3P22001 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNA3P22001 SNX33P1-201ENST00000592116 1762 ntBASIC20.23■□□□□ 0.83
KCNA3P22001 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNA3P22001 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNA3P22001 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms