Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AL671710.1-201ENST00000610245 2349 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 AC012569.1-201ENST00000591191 1524 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL3L1P16619 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL3L1P16619 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 RHOQP3-201ENST00000437982 621 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL3L1P16619 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL3L1P16619 CYP2A7P1-201ENST00000595391 815 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.84□□□□□ -0.19
CCL3L1P16619 AL671883.3-201ENST00000603274 991 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 AC023141.13-201ENST00000604991 943 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 AC013467.2-201ENST00000605472 835 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.84□□□□□ -0.19
CCL3L1P16619 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL3L1P16619 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL3L1P16619 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.84□□□□□ -0.19
CCL3L1P16619 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL3L1P16619 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL3L1P16619 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CCL3L1P16619 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.83□□□□□ -0.19
CCL3L1P16619 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL3L1P16619 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL3L1P16619 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.83□□□□□ -0.19
CCL3L1P16619 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.83□□□□□ -0.19
CCL3L1P16619 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCL3L1P16619 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 AC025580.3-201ENST00000617932 1424 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL3L1P16619 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL3L1P16619 HCG4-201ENST00000418983 998 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL3L1P16619 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL3L1P16619 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CCL3L1P16619 MIR4515-201ENST00000584082 81 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL3L1P16619 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCL3L1P16619 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL3L1P16619 AL513190.1-201ENST00000621254 727 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 AP001350.2-201ENST00000625104 1094 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 AC007064.4-201ENST00000637740 555 ntBASIC13.83□□□□□ -0.2
CCL3L1P16619 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL3L1P16619 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL3L1P16619 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CCL3L1P16619 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL3L1P16619 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL3L1P16619 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms