Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.77■□□□□ 0.6
COL11A1P12107 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL11A1P12107 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COL11A1P12107 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.77■□□□□ 0.6
COL11A1P12107 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.77■□□□□ 0.6
COL11A1P12107 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.77■□□□□ 0.6
COL11A1P12107 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.77■□□□□ 0.6
COL11A1P12107 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.77■□□□□ 0.6
COL11A1P12107 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
COL11A1P12107 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.77■□□□□ 0.59
COL11A1P12107 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.77■□□□□ 0.59
COL11A1P12107 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
COL11A1P12107 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.77■□□□□ 0.59
COL11A1P12107 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL11A1P12107 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.77■□□□□ 0.59
COL11A1P12107 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.77■□□□□ 0.59
COL11A1P12107 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.77■□□□□ 0.59
COL11A1P12107 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.77■□□□□ 0.59
COL11A1P12107 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.77■□□□□ 0.59
COL11A1P12107 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 AC063926.2-201ENST00000623766 1308 ntBASIC18.76■□□□□ 0.59
COL11A1P12107 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.76■□□□□ 0.59
COL11A1P12107 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
COL11A1P12107 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.76■□□□□ 0.59
COL11A1P12107 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 OR8S1-201ENST00000310194 1080 ntBASIC18.76■□□□□ 0.59
COL11A1P12107 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL11A1P12107 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL11A1P12107 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.76■□□□□ 0.59
COL11A1P12107 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.76■□□□□ 0.59
COL11A1P12107 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.76■□□□□ 0.59
COL11A1P12107 AC027307.3-201ENST00000594262 1100 ntBASIC18.76■□□□□ 0.59
COL11A1P12107 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL11A1P12107 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.76■□□□□ 0.59
COL11A1P12107 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL11A1P12107 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.76■□□□□ 0.59
COL11A1P12107 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL11A1P12107 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL11A1P12107 CU639417.3-201ENST00000624240 1404 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 DGCR5-201ENST00000399539 862 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.75■□□□□ 0.59
COL11A1P12107 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.75■□□□□ 0.59
COL11A1P12107 AC135586.1-201ENST00000539323 574 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 AC044860.1-202ENST00000559481 777 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 AC132938.2-201ENST00000579188 680 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.75■□□□□ 0.59
COL11A1P12107 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.75■□□□□ 0.59
COL11A1P12107 AL591163.1-201ENST00000641757 987 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.75■□□□□ 0.59
COL11A1P12107 GGT3P-204ENST00000453783 1664 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 AL391256.1-201ENST00000443260 1855 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
COL11A1P12107 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.75■□□□□ 0.59
COL11A1P12107 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL11A1P12107 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL11A1P12107 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.75■□□□□ 0.59
COL11A1P12107 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms