Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THRAP10827 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THRAP10827 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
THRAP10827 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
THRAP10827 AC132938.5-201ENST00000624980 1813 ntBASIC16.89■□□□□ 0.29
THRAP10827 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
THRAP10827 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.88■□□□□ 0.29
THRAP10827 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 AC093525.9-201ENST00000624961 1746 ntBASIC16.88■□□□□ 0.29
THRAP10827 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
THRAP10827 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
THRAP10827 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
THRAP10827 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.88■□□□□ 0.29
THRAP10827 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.88■□□□□ 0.29
THRAP10827 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.88■□□□□ 0.29
THRAP10827 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 AL589182.2-201ENST00000619332 1049 ntBASIC16.88■□□□□ 0.29
THRAP10827 AC005593.1-201ENST00000624894 515 ntBASIC16.88■□□□□ 0.29
THRAP10827 AC008741.2-201ENST00000612792 3115 ntBASIC16.88■□□□□ 0.29
THRAP10827 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.88■□□□□ 0.29
THRAP10827 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THRAP10827 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
THRAP10827 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.87■□□□□ 0.29
THRAP10827 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.87■□□□□ 0.29
THRAP10827 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.87■□□□□ 0.29
THRAP10827 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.87■□□□□ 0.29
THRAP10827 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.87■□□□□ 0.29
THRAP10827 AC136632.2-201ENST00000512891 861 ntBASIC16.87■□□□□ 0.29
THRAP10827 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.87■□□□□ 0.29
THRAP10827 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.87■□□□□ 0.29
THRAP10827 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 AC092053.1-201ENST00000605787 1936 ntBASIC16.87■□□□□ 0.29
THRAP10827 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 AC078925.2-201ENST00000624013 1973 ntBASIC16.87■□□□□ 0.29
THRAP10827 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 PCDHB17P-201ENST00000539533 2393 ntBASIC16.87■□□□□ 0.29
THRAP10827 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.87■□□□□ 0.29
THRAP10827 RNF216P1-203ENST00000404404 2427 ntBASIC16.87■□□□□ 0.29
THRAP10827 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THRAP10827 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
THRAP10827 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.86■□□□□ 0.29
THRAP10827 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.86■□□□□ 0.29
THRAP10827 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
THRAP10827 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms