Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CSB-PGBD3P0DP91 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AL080243.2-201ENST00000418783 582 ntBASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 DFFBP1-201ENST00000433250 979 ntBASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AL133215.2-201ENST00000609242 977 ntBASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC135050.7-201ENST00000624508 2218 ntBASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.04■■□□□ 1.12
CSB-PGBD3P0DP91 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 AL671710.1-201ENST00000610245 2349 ntBASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.03■■□□□ 1.12
CSB-PGBD3P0DP91 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 SPDYE19P-201ENST00000338590 713 ntBASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 RN7SL618P-201ENST00000477850 296 ntBASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.02■■□□□ 1.12
CSB-PGBD3P0DP91 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms