Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LDLRP01130 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.28■□□□□ 0.2
LDLRP01130 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.28■□□□□ 0.2
LDLRP01130 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.28■□□□□ 0.2
LDLRP01130 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 AC010327.4-202ENST00000591484 748 ntBASIC16.28■□□□□ 0.2
LDLRP01130 FAM197Y3-203ENST00000618346 717 ntBASIC16.28■□□□□ 0.2
LDLRP01130 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.28■□□□□ 0.2
LDLRP01130 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LDLRP01130 AL662844.4-201ENST00000606367 2838 ntBASIC16.28■□□□□ 0.2
LDLRP01130 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LDLRP01130 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 TSPY26P-202ENST00000565928 3884 ntBASIC16.28■□□□□ 0.2
LDLRP01130 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 KRT89P-201ENST00000620027 1478 ntBASIC16.28■□□□□ 0.2
LDLRP01130 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDLRP01130 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.28■□□□□ 0.2
LDLRP01130 AC104109.2-201ENST00000602919 1418 ntBASIC16.28■□□□□ 0.2
LDLRP01130 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LDLRP01130 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LDLRP01130 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LDLRP01130 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LDLRP01130 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LDLRP01130 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.27■□□□□ 0.2
LDLRP01130 GPX1P2-201ENST00000429271 606 ntBASIC16.27■□□□□ 0.2
LDLRP01130 FGFR3P6-201ENST00000457012 610 ntBASIC16.27■□□□□ 0.2
LDLRP01130 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.27■□□□□ 0.2
LDLRP01130 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.27■□□□□ 0.2
LDLRP01130 AL356488.2-201ENST00000602755 427 ntBASIC16.27■□□□□ 0.2
LDLRP01130 AC079781.4-201ENST00000641908 219 ntBASIC16.27■□□□□ 0.2
LDLRP01130 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.27■□□□□ 0.2
LDLRP01130 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LDLRP01130 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.27■□□□□ 0.2
LDLRP01130 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDLRP01130 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.27■□□□□ 0.19
LDLRP01130 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDLRP01130 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LDLRP01130 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LDLRP01130 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.27■□□□□ 0.19
LDLRP01130 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LDLRP01130 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.27■□□□□ 0.19
LDLRP01130 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.27■□□□□ 0.19
LDLRP01130 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LDLRP01130 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LDLRP01130 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LDLRP01130 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRP01130 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.26■□□□□ 0.19
LDLRP01130 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRP01130 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LDLRP01130 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.26■□□□□ 0.19
LDLRP01130 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 RBM17P3-201ENST00000417687 1192 ntBASIC16.26■□□□□ 0.19
LDLRP01130 MED15P5-201ENST00000423150 992 ntBASIC16.26■□□□□ 0.19
LDLRP01130 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LDLRP01130 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.26■□□□□ 0.19
LDLRP01130 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 IGHV3-22-201ENST00000520721 359 ntBASIC16.26■□□□□ 0.19
LDLRP01130 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.26■□□□□ 0.19
LDLRP01130 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRP01130 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.26■□□□□ 0.19
LDLRP01130 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.26■□□□□ 0.19
LDLRP01130 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms