Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
TIMP1P01033 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
TIMP1P01033 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.89■□□□□ 0.45
TIMP1P01033 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.89■□□□□ 0.45
TIMP1P01033 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.89■□□□□ 0.45
TIMP1P01033 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.89■□□□□ 0.45
TIMP1P01033 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.89■□□□□ 0.45
TIMP1P01033 AC092337.1-201ENST00000568699 1129 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.89■□□□□ 0.45
TIMP1P01033 BTNL10-201ENST00000595971 695 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 MIR6787-201ENST00000616675 61 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TIMP1P01033 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.89■□□□□ 0.45
TIMP1P01033 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 TUBB8P12-201ENST00000308911 1335 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 TUBB7P-202ENST00000428444 1305 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 TUBB8P7-204ENST00000567960 1332 ntBASIC17.89■□□□□ 0.45
TIMP1P01033 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TIMP1P01033 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TIMP1P01033 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TIMP1P01033 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.88■□□□□ 0.45
TIMP1P01033 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 AC093724.1-201ENST00000448659 1027 ntBASIC17.88■□□□□ 0.45
TIMP1P01033 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.88■□□□□ 0.45
TIMP1P01033 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.88■□□□□ 0.45
TIMP1P01033 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.88■□□□□ 0.45
TIMP1P01033 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.88■□□□□ 0.45
TIMP1P01033 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TIMP1P01033 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
TIMP1P01033 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.87■□□□□ 0.45
TIMP1P01033 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TIMP1P01033 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TIMP1P01033 KRT43P-201ENST00000434019 910 ntBASIC17.87■□□□□ 0.45
TIMP1P01033 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.87■□□□□ 0.45
TIMP1P01033 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.87■□□□□ 0.45
TIMP1P01033 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.87■□□□□ 0.45
TIMP1P01033 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TIMP1P01033 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.87■□□□□ 0.45
TIMP1P01033 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.87■□□□□ 0.45
TIMP1P01033 GPR182-203ENST00000622922 591 ntBASIC17.87■□□□□ 0.45
TIMP1P01033 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.87■□□□□ 0.45
TIMP1P01033 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 AL589702.1-201ENST00000641229 1509 ntBASIC17.87■□□□□ 0.45
TIMP1P01033 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TIMP1P01033 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TIMP1P01033 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms