Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 HCG4-201ENST00000418983 998 ntBASIC17.55■□□□□ 0.4
TRUB2O95900 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.55■□□□□ 0.4
TRUB2O95900 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRUB2O95900 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRUB2O95900 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.55■□□□□ 0.4
TRUB2O95900 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRUB2O95900 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.54■□□□□ 0.4
TRUB2O95900 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRUB2O95900 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 AC012569.1-201ENST00000591191 1524 ntBASIC17.54■□□□□ 0.4
TRUB2O95900 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.54■□□□□ 0.4
TRUB2O95900 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.54■□□□□ 0.4
TRUB2O95900 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.54■□□□□ 0.4
TRUB2O95900 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.54■□□□□ 0.4
TRUB2O95900 AC087641.1-201ENST00000557561 1021 ntBASIC17.54■□□□□ 0.4
TRUB2O95900 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.54■□□□□ 0.4
TRUB2O95900 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.54■□□□□ 0.4
TRUB2O95900 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 AL645728.2-201ENST00000641974 660 ntBASIC17.54■□□□□ 0.4
TRUB2O95900 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRUB2O95900 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRUB2O95900 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRUB2O95900 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRUB2O95900 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRUB2O95900 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.53■□□□□ 0.4
TRUB2O95900 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRUB2O95900 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.53■□□□□ 0.4
TRUB2O95900 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
TRUB2O95900 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.53■□□□□ 0.4
TRUB2O95900 PDPK2P-202ENST00000562415 1191 ntBASIC17.53■□□□□ 0.4
TRUB2O95900 AL031432.2-201ENST00000566714 459 ntBASIC17.53■□□□□ 0.4
TRUB2O95900 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.53■□□□□ 0.4
TRUB2O95900 AL928711.1-201ENST00000570165 459 ntBASIC17.53■□□□□ 0.4
TRUB2O95900 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.53■□□□□ 0.4
TRUB2O95900 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.53■□□□□ 0.4
TRUB2O95900 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRUB2O95900 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRUB2O95900 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TRUB2O95900 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.53■□□□□ 0.4
TRUB2O95900 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRUB2O95900 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRUB2O95900 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms