Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 AL592309.1-201ENST00000443127 649 ntBASIC19.95■□□□□ 0.78
MBD4O95243 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD4O95243 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.95■□□□□ 0.78
MBD4O95243 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD4O95243 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MBD4O95243 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MBD4O95243 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD4O95243 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD4O95243 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD4O95243 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD4O95243 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
MBD4O95243 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.94■□□□□ 0.78
MBD4O95243 AL627223.1-201ENST00000416693 442 ntBASIC19.94■□□□□ 0.78
MBD4O95243 AC069335.1-201ENST00000489972 472 ntBASIC19.94■□□□□ 0.78
MBD4O95243 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.94■□□□□ 0.78
MBD4O95243 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.94■□□□□ 0.78
MBD4O95243 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MBD4O95243 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD4O95243 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
MBD4O95243 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MBD4O95243 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD4O95243 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD4O95243 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MBD4O95243 AC106886.4-201ENST00000623557 2502 ntBASIC19.94■□□□□ 0.78
MBD4O95243 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD4O95243 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD4O95243 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 METTL21AP1-201ENST00000438852 635 ntBASIC19.93■□□□□ 0.78
MBD4O95243 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD4O95243 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD4O95243 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
MBD4O95243 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 KRT18P28-201ENST00000453838 1332 ntBASIC19.93■□□□□ 0.78
MBD4O95243 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD4O95243 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MBD4O95243 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.92■□□□□ 0.78
MBD4O95243 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MBD4O95243 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.92■□□□□ 0.78
MBD4O95243 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD4O95243 AL139400.1-201ENST00000366220 510 ntBASIC19.92■□□□□ 0.78
MBD4O95243 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD4O95243 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD4O95243 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.92■□□□□ 0.78
MBD4O95243 AC005237.2-201ENST00000434368 219 ntBASIC19.92■□□□□ 0.78
MBD4O95243 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD4O95243 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms